Index

_

__init__() (pyunicorn.climate.climate_data.ClimateData method) (pyunicorn.climate.climate_network.ClimateNetwork method) (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method) (pyunicorn.climate.havlin.HavlinClimateNetwork method) (pyunicorn.climate.hilbert.HilbertClimateNetwork method) (pyunicorn.climate.map_plots.MapPlots method) (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.climate.partial_correlation.PartialCorrelationClimateNetwork method) (pyunicorn.climate.rainfall.RainfallClimateNetwork method) (pyunicorn.climate.spearman.SpearmanClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method) (pyunicorn.core.data.Data method) (pyunicorn.core.geo_network.GeoNetwork method) (pyunicorn.core.grid.Grid method) (pyunicorn.core.interacting_networks.InteractingNetworks method) (pyunicorn.core.netcdf_dictionary.NetCDFDictionary method) (pyunicorn.core.network.Network method) (pyunicorn.core.resistive_network.ResNetwork method) (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method) (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method) (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) (pyunicorn.timeseries.surrogates.Surrogates method) (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) __len__() (pyunicorn.core.network.Network method) __str__() (pyunicorn.climate.climate_data.ClimateData method) (pyunicorn.climate.climate_network.ClimateNetwork method) (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method) (pyunicorn.climate.havlin.HavlinClimateNetwork method) (pyunicorn.climate.hilbert.HilbertClimateNetwork method) (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.climate.partial_correlation.PartialCorrelationClimateNetwork method) (pyunicorn.climate.rainfall.RainfallClimateNetwork method) (pyunicorn.climate.spearman.SpearmanClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method) (pyunicorn.core.data.Data method) (pyunicorn.core.geo_network.GeoNetwork method) (pyunicorn.core.grid.Grid method) (pyunicorn.core.interacting_networks.InteractingNetworks method) (pyunicorn.core.netcdf_dictionary.NetCDFDictionary method) (pyunicorn.core.network.Network method) (pyunicorn.core.resistive_network.ResNetwork method) (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method) (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method) (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) (pyunicorn.timeseries.surrogates.Surrogates method) (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)

__weakref__ (pyunicorn.climate.map_plots.MapPlots attribute) (pyunicorn.core.data.Data attribute) (pyunicorn.core.grid.Grid attribute) (pyunicorn.core.netcdf_dictionary.NetCDFDictionary attribute) (pyunicorn.core.network.Network attribute) (pyunicorn.core.network.NetworkError attribute) (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis attribute) (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython attribute) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) (pyunicorn.timeseries.surrogates.Surrogates attribute) _calculate_angular_distance() (pyunicorn.core.grid.Grid method) _calculate_anomaly() (pyunicorn.climate.climate_data.ClimateData method) _calculate_cc() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) _calculate_correlation() (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method) (pyunicorn.climate.partial_correlation.PartialCorrelationClimateNetwork method) (pyunicorn.climate.rainfall.RainfallClimateNetwork method) (pyunicorn.climate.spearman.SpearmanClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method) _calculate_correlation_strength() (pyunicorn.climate.havlin.HavlinClimateNetwork method) _calculate_general_average_link_distance() (pyunicorn.core.geo_network.GeoNetwork method) _calculate_general_average_path_length() (pyunicorn.core.interacting_networks.InteractingNetworks static method) _calculate_general_closeness() (pyunicorn.core.interacting_networks.InteractingNetworks method) _calculate_general_connectivity_weighted_distance() (pyunicorn.core.geo_network.GeoNetwork method) _calculate_hilbert_correlation() (pyunicorn.climate.hilbert.HilbertClimateNetwork method) _calculate_mi() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) _calculate_mutual_information() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) _calculate_non_local_adjacency() (pyunicorn.climate.climate_network.ClimateNetwork method) _calculate_phase_mean() (pyunicorn.climate.climate_data.ClimateData method) _calculate_threshold_adjacency() (pyunicorn.climate.climate_network.ClimateNetwork method) _cum_histogram() (pyunicorn.core.network.Network static method) _cython_calculate_mutual_information() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) _eigenvector_centrality_slow() (pyunicorn.core.network.Network method) _get_nearest_neighbors() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method) _get_netcdf_data() (pyunicorn.core.data.Data class method) _histogram() (pyunicorn.core.network.Network static method) _load_data() (pyunicorn.core.data.Data class method) _motif_clustering_helper() (pyunicorn.core.network.Network method) _par_corr_to_cmi() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method) _quantile_bin_array() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method) _regenerate_network() (pyunicorn.climate.climate_network.ClimateNetwork method) _set_adjacency() (pyunicorn.core.network.Network method) _set_directed() (pyunicorn.climate.hilbert.HilbertClimateNetwork method) _set_max_delay() (pyunicorn.climate.havlin.HavlinClimateNetwork method) _set_node_weights() (pyunicorn.core.network.Network method) _set_winter_only() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method)

A

AAFT_surrogates() (pyunicorn.timeseries.surrogates.Surrogates method) abort() (in module pyunicorn.utils.mpi) adaptive neighborhood size recurrence network recurrence plot add_dataset() (pyunicorn.climate.map_plots.MapPlots method) add_multiple_datasets() (pyunicorn.climate.map_plots.MapPlots method) add_multiple_datasets_npy() (pyunicorn.climate.map_plots.MapPlots method) adjacency (pyunicorn.core.network.Network attribute) adjacency_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) adjacency_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) admittance_lapacian() (pyunicorn.core.resistive_network.ResNetwork method) admittive_degree() (pyunicorn.core.resistive_network.ResNetwork method) advanced_betweenness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) advanced_closeness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) advanced_degree() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) advanced_local_clustering() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) angular_distance() (pyunicorn.core.geo_network.GeoNetwork method) (pyunicorn.core.grid.Grid method) anomaly() (pyunicorn.climate.climate_data.ClimateData method)

anomaly_selected_months() (pyunicorn.climate.climate_data.ClimateData method) area_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method) area_weighted_connectivity_cumulative_distribution() (pyunicorn.core.geo_network.GeoNetwork method) area_weighted_connectivity_distribution() (pyunicorn.core.geo_network.GeoNetwork method) arenas_betweenness() (pyunicorn.core.network.Network method) assortativity() (pyunicorn.core.network.Network method) average diagonal line length vertical line length white vertical line length average_diaglength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) average_distance_weighted_path_length() (pyunicorn.core.geo_network.GeoNetwork method) average_effective_resistance() (pyunicorn.core.resistive_network.ResNetwork method) average_link_attribute() (pyunicorn.core.network.Network method) average_link_distance() (pyunicorn.core.geo_network.GeoNetwork method) average_neighbor_area_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method) average_neighbors_admittive_degree() (pyunicorn.core.resistive_network.ResNetwork method) average_neighbors_degree() (pyunicorn.core.network.Network method) average_path_length() (pyunicorn.core.network.Network method) average_vertlength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) average_white_vertlength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)

B

balance() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) BarabasiAlbert() (pyunicorn.core.geo_network.GeoNetwork static method) (pyunicorn.core.network.Network static method) BarabasiAlbert_igraph() (pyunicorn.core.network.Network static method) betweenness() (pyunicorn.core.network.Network method) bildegree() (pyunicorn.core.network.Network method)

bincount_hist() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method) bootstrap_distance_matrix() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) boundaries() (pyunicorn.core.grid.Grid method) boundary() (pyunicorn.core.geo_network.GeoNetwork method) boundary_corrected_closeness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) boundary_corrected_degree() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)

C

cache_helper() (in module pyunicorn.core.network) cached_const() (in module pyunicorn.core.network) cached_var() (in module pyunicorn.core.network) calculate_corr() (pyunicorn.climate.rainfall.RainfallClimateNetwork method) calculate_rainfall() (pyunicorn.climate.rainfall.RainfallClimateNetwork static method) calculate_similarity_measure() (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method) (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method) calculate_top_events() (pyunicorn.climate.rainfall.RainfallClimateNetwork static method) clear_cache() (pyunicorn.climate.climate_data.ClimateData method) (pyunicorn.climate.climate_network.ClimateNetwork method) (pyunicorn.climate.havlin.HavlinClimateNetwork method) (pyunicorn.climate.hilbert.HilbertClimateNetwork method) (pyunicorn.core.data.Data method) (pyunicorn.core.geo_network.GeoNetwork method) (pyunicorn.core.grid.Grid method) (pyunicorn.core.network.Network method) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method) (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) (pyunicorn.timeseries.surrogates.Surrogates method) clear_link_attribute() (pyunicorn.core.network.Network method) clear_nsi_cache() (pyunicorn.core.network.Network method) clear_paths_cache() (pyunicorn.core.network.Network method) ClimateData (class in pyunicorn.climate.climate_data) ClimateNetwork (class in pyunicorn.climate.climate_network) closeness() (pyunicorn.core.network.Network method) coherence() (pyunicorn.climate.hilbert.HilbertClimateNetwork method) ConfigurationModel() (pyunicorn.core.geo_network.GeoNetwork static method) (pyunicorn.core.network.Network static method) connectivity_weighted_distance() (pyunicorn.core.geo_network.GeoNetwork method) convert_lon_coordinates() (pyunicorn.core.grid.Grid method) coord_sequence_from_rect_grid() (pyunicorn.core.grid.Grid static method) copy() (pyunicorn.core.network.Network method) coreness() (pyunicorn.core.network.Network method) correlated_noise_surrogates() (pyunicorn.timeseries.surrogates.Surrogates method) correlatedNoiseSurrogates() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) correlation() (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method) correlation_distance() (pyunicorn.climate.climate_network.ClimateNetwork method) correlation_distance_weighted_closeness() (pyunicorn.climate.climate_network.ClimateNetwork method) correlation_lag() (pyunicorn.climate.havlin.HavlinClimateNetwork method) correlation_lag_weighted_average_path_length() (pyunicorn.climate.havlin.HavlinClimateNetwork method) correlation_lag_weighted_closeness() (pyunicorn.climate.havlin.HavlinClimateNetwork method) correlation_strength() (pyunicorn.climate.havlin.HavlinClimateNetwork method) correlation_strength_weighted_average_path_length() (pyunicorn.climate.havlin.HavlinClimateNetwork method) correlation_strength_weighted_closeness() (pyunicorn.climate.havlin.HavlinClimateNetwork method) correlation_weighted_average_path_length() (pyunicorn.climate.tsonis.TsonisClimateNetwork method)

correlation_weighted_closeness() (pyunicorn.climate.tsonis.TsonisClimateNetwork method) cos_lat() (pyunicorn.core.grid.Grid method) cos_lon() (pyunicorn.core.grid.Grid method) cos_window() (pyunicorn.core.data.Data static method) CoupledClimateNetwork (class in pyunicorn.climate.coupled_climate_network) CoupledTsonisClimateNetwork (class in pyunicorn.climate.coupled_tsonis) CouplingAnalysis (class in pyunicorn.funcnet.coupling_analysis) CouplingAnalysisPurePython (class in pyunicorn.funcnet.coupling_analysis_pure_python) CR (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute) create_plogp() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method) cross recurrence plot RQA cross_adjacency() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_adjacency_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_average_path_length() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_betweenness() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_closeness() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_correlation() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method) (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) cross_degree() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_global_clustering() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_global_clustering_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_global_clustering_xy() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) cross_global_clustering_yx() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) cross_indegree() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_layer_adjacency() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) cross_link_attribute() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_link_density() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_local_clustering() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_local_clustering_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_outdegree() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_path_lengths() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_recurrence_rate() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) cross_similarity_measure() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) cross_transitivity() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_transitivity_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_transitivity_xy() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) cross_transitivity_yx() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) CrossRecurrencePlot (class in pyunicorn.timeseries.cross_recurrence_plot)

D

Data (class in pyunicorn.core.data) data (pyunicorn.climate.hilbert.HilbertClimateNetwork attribute) (pyunicorn.climate.rainfall.RainfallClimateNetwork attribute) (pyunicorn.climate.tsonis.TsonisClimateNetwork attribute) degree() (pyunicorn.core.network.Network method) degree_cdf() (pyunicorn.core.network.Network method) degree_distribution() (pyunicorn.core.network.Network method) del_link_attribute() (pyunicorn.core.network.Network method) del_node_attribute() (pyunicorn.core.network.Network method) delay embedding determinism RQA determinism() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) diag_entropy() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) diagline_dist() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)

diagonal line entropy line length, average line length, frequency distribution line length, maximum lines diameter() (pyunicorn.core.network.Network method) diameter_effective_resistance() (pyunicorn.core.resistive_network.ResNetwork method) distance_based_measures() (pyunicorn.core.network.Network method) distance_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) distance_weighted_closeness() (pyunicorn.core.geo_network.GeoNetwork method) do_nsi_clustering() (pyunicorn.core.network.Network method) do_nsi_hamming_clustering() (pyunicorn.core.network.Network method) do_nsi_pca_clustering() (pyunicorn.core.network.Network method)

E

ECA() (in module pyunicorn.eventseries.eca) edge_betweenness() (pyunicorn.core.network.Network method) edge_current_flow_betweenness() (pyunicorn.core.resistive_network.ResNetwork method) edge_list() (pyunicorn.core.network.Network method) effective_resistance() (pyunicorn.core.resistive_network.ResNetwork method) effective_resistance_closeness_centrality() (pyunicorn.core.resistive_network.ResNetwork method) eigenvector_centrality() (pyunicorn.core.network.Network method) embed_time_series() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method)

embed_time_series_array() (pyunicorn.timeseries.surrogates.Surrogates method) embedding (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) ErdosRenyi() (pyunicorn.core.geo_network.GeoNetwork static method) (pyunicorn.core.network.Network static method) euclidean_distance() (pyunicorn.core.grid.Grid method) euclidean_distance_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) eval_fast_code() (pyunicorn.timeseries.surrogates.Surrogates static method)

F

frequency distribution diagonal line length vertical line length white vertical line length

from_file() (pyunicorn.core.netcdf_dictionary.NetCDFDictionary static method) FromIGraph() (pyunicorn.core.network.Network static method)

G

generate_map_plots() (pyunicorn.climate.map_plots.MapPlots method) generate_multiple_map_plots() (pyunicorn.climate.map_plots.MapPlots method) generate_multiple_map_plots_npy() (pyunicorn.climate.map_plots.MapPlots method) geographical_cumulative_distribution() (pyunicorn.core.geo_network.GeoNetwork method) geographical_distribution() (pyunicorn.core.geo_network.GeoNetwork method) geometric_distance_distribution() (pyunicorn.core.grid.Grid method) GeoNetwork (class in pyunicorn.core.geo_network) get_admittance() (pyunicorn.core.resistive_network.ResNetwork method) get_max_delay() (pyunicorn.climate.havlin.HavlinClimateNetwork method) get_next_result() (in module pyunicorn.utils.mpi) get_R() (pyunicorn.core.resistive_network.ResNetwork method) get_result() (in module pyunicorn.utils.mpi)

global_admittive_clustering() (pyunicorn.core.resistive_network.ResNetwork method) global_clustering() (pyunicorn.core.network.Network method) global_efficiency() (pyunicorn.core.network.Network method) Grid (class in pyunicorn.core.grid) grid (pyunicorn.climate.map_plots.MapPlots attribute) (pyunicorn.core.data.Data attribute) grid() (pyunicorn.core.grid.Grid method) grid_1 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) grid_2 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) grid_size() (pyunicorn.core.grid.Grid method) GrowPreferentially() (pyunicorn.core.network.Network static method) GrowPreferentially_old() (pyunicorn.core.network.Network static method) GrowWeights() (pyunicorn.core.network.Network static method)

H

hamming_distance_from() (pyunicorn.core.network.Network method) HavlinClimateNetwork (class in pyunicorn.climate.havlin)

higher_order_transitivity() (pyunicorn.core.network.Network method) HilbertClimateNetwork (class in pyunicorn.climate.hilbert)

I

inarea_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method) inarea_weighted_connectivity_cumulative_distribution() (pyunicorn.core.geo_network.GeoNetwork method) inarea_weighted_connectivity_distribution() (pyunicorn.core.geo_network.GeoNetwork method) inaverage_link_distance() (pyunicorn.core.geo_network.GeoNetwork method) inconnectivity_weighted_distance() (pyunicorn.core.geo_network.GeoNetwork method) indegree() (pyunicorn.core.network.Network method) indegree_cdf() (pyunicorn.core.network.Network method) indegree_distribution() (pyunicorn.core.network.Network method) indices_selected_months() (pyunicorn.climate.climate_data.ClimateData method) indices_selected_phases() (pyunicorn.climate.climate_data.ClimateData method) info() (in module pyunicorn.utils.mpi) information_transfer() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method) inter_system_recurrence_matrix() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) InteractingNetworks (class in pyunicorn.core.interacting_networks) internal_adjacency() (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_average_path_length() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_betweenness() (pyunicorn.core.interacting_networks.InteractingNetworks method)

internal_betweenness_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) internal_betweenness_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) internal_closeness() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_degree() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_global_clustering() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_indegree() (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_link_attribute() (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_link_density() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_outdegree() (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_path_lengths() (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_recurrence_rates() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) interregional_betweenness() (pyunicorn.core.network.Network method) InterSystemRecurrenceNetwork (class in pyunicorn.timeseries.inter_system_recurrence_network) intotal_link_distance() (pyunicorn.core.geo_network.GeoNetwork method) inv_correlation_distance() (pyunicorn.climate.climate_network.ClimateNetwork method)

J

joint recurrence plot RQA

JointRecurrenceNetwork (class in pyunicorn.timeseries.joint_recurrence_network) JointRecurrencePlot (class in pyunicorn.timeseries.joint_recurrence_plot) JR (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

L

lag (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute) laminarity laminarity() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) laplacian() (pyunicorn.core.network.Network method) lat_sequence() (pyunicorn.core.grid.Grid method) legendre_coordinates() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) line entropy diagonal vertical white vertical line length average diagonal average vertical average white vertical frequency distribution diagonal frequency distribution vertical frequency distribution white vertical maximum diagonal maximum vertical maximum white vertical lines diagonal vertical white vertical link_attribute() (pyunicorn.core.network.Network method) link_betweenness() (pyunicorn.core.network.Network method)

link_density_function() (pyunicorn.climate.climate_network.ClimateNetwork method) link_distance_distribution() (pyunicorn.core.geo_network.GeoNetwork method) Load() (pyunicorn.climate.climate_data.ClimateData class method) (pyunicorn.climate.climate_network.ClimateNetwork static method) (pyunicorn.core.data.Data class method) (pyunicorn.core.geo_network.GeoNetwork static method) (pyunicorn.core.grid.Grid static method) (pyunicorn.core.network.Network static method) LoadTXT() (pyunicorn.core.grid.Grid static method) local_admittive_clustering() (pyunicorn.core.resistive_network.ResNetwork method) local_cliquishness() (pyunicorn.core.network.Network method) local_clustering() (pyunicorn.core.network.Network method) local_clustering_dim_single_scale() (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) local_correlation_distance_weighted_vulnerability() (pyunicorn.climate.climate_network.ClimateNetwork method) local_correlation_lag_weighted_vulnerability() (pyunicorn.climate.havlin.HavlinClimateNetwork method) local_correlation_strength_weighted_vulnerability() (pyunicorn.climate.havlin.HavlinClimateNetwork method) local_correlation_weighted_vulnerability() (pyunicorn.climate.tsonis.TsonisClimateNetwork method) local_cyclemotif_clustering() (pyunicorn.core.network.Network method) local_distance_weighted_vulnerability() (pyunicorn.core.geo_network.GeoNetwork method) local_geographical_clustering() (pyunicorn.core.geo_network.GeoNetwork method) local_inmotif_clustering() (pyunicorn.core.network.Network method) local_midmotif_clustering() (pyunicorn.core.network.Network method) local_mutual_information_weighted_vulnerability() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) local_outmotif_clustering() (pyunicorn.core.network.Network method) local_tsonis_clustering() (pyunicorn.core.geo_network.GeoNetwork method) local_vulnerability() (pyunicorn.core.network.Network method) lon_sequence() (pyunicorn.core.grid.Grid method)

M

M (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute) manhattan_distance_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) map_data (pyunicorn.climate.map_plots.MapPlots attribute) map_mult_data (pyunicorn.climate.map_plots.MapPlots attribute) MapPlots (class in pyunicorn.climate.map_plots) matching_index() (pyunicorn.core.network.Network method) max_diaglength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) max_link_distance() (pyunicorn.core.geo_network.GeoNetwork method) max_neighbor_area_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method) max_neighbors_degree() (pyunicorn.core.network.Network method) max_vertlength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) max_white_vertlength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) maximum diagonal line length vertical line length white vertical line length

mean recurrence time mean_recurrence_time() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) metric (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) missing_values (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) (pyunicorn.timeseries.visibility_graph.VisibilityGraph attribute) msf_synchronizability() (pyunicorn.core.network.Network method) mutual_information() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method) (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) mutual_information_edges() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) mutual_information_weighted_average_path_length() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) mutual_information_weighted_closeness() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) MutualInfoClimateNetwork (class in pyunicorn.climate.mutual_info)

N

N (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) N_1 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) N_2 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) N_x (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) N_y (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) NetCDFDictionary (class in pyunicorn.core.netcdf_dictionary) Network (class in pyunicorn.core.network) network_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) network_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) NetworkError newman_betweenness() (pyunicorn.core.network.Network method) next_power_2() (pyunicorn.core.data.Data static method) node_attribute() (pyunicorn.core.network.Network method) node_coordinates() (pyunicorn.core.grid.Grid method) node_number() (pyunicorn.core.grid.Grid method) node_weights (pyunicorn.core.network.Network attribute) nodes_1 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) nodes_2 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) non_local() (pyunicorn.climate.climate_network.ClimateNetwork method) normalize time series time series array, [1] normalize_time_series() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) normalize_time_series_array() (pyunicorn.core.data.Data static method) (pyunicorn.timeseries.surrogates.Surrogates static method) nsi_arenas_betweenness() (pyunicorn.core.network.Network method) nsi_average_neighbors_degree() (pyunicorn.core.network.Network method) nsi_average_path_length() (pyunicorn.core.network.Network method) nsi_betweenness() (pyunicorn.core.network.Network method) nsi_closeness() (pyunicorn.core.network.Network method) nsi_connected_hamming_cluster_tree() (pyunicorn.core.geo_network.GeoNetwork method) nsi_cross_average_path_length() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_betweenness() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_closeness_centrality() (pyunicorn.core.interacting_networks.InteractingNetworks method)

nsi_cross_degree() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_edge_density() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_global_clustering() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_local_clustering() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_mean_degree() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_transitivity() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_degree() (pyunicorn.core.network.Network method) nsi_degree_cumulative_histogram() (pyunicorn.core.network.Network method) nsi_degree_histogram() (pyunicorn.core.network.Network method) nsi_degree_uncorr() (pyunicorn.core.network.Network method) nsi_eigenvector_centrality() (pyunicorn.core.network.Network method) nsi_exponential_closeness() (pyunicorn.core.network.Network method) nsi_global_clustering() (pyunicorn.core.network.Network method) nsi_global_efficiency() (pyunicorn.core.network.Network method) nsi_harmonic_closeness() (pyunicorn.core.network.Network method) nsi_indegree() (pyunicorn.core.network.Network method) nsi_internal_closeness_centrality() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_internal_degree() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_internal_local_clustering() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_interregional_betweenness() (pyunicorn.core.network.Network method) nsi_laplacian() (pyunicorn.core.network.Network method) nsi_local_clustering() (pyunicorn.core.network.Network method) nsi_local_clustering_uncorr() (pyunicorn.core.network.Network method) nsi_local_cyclemotif_clustering() (pyunicorn.core.network.Network method) nsi_local_inmotif_clustering() (pyunicorn.core.network.Network method) nsi_local_midmotif_clustering() (pyunicorn.core.network.Network method) nsi_local_outmotif_clustering() (pyunicorn.core.network.Network method) nsi_local_soffer_clustering() (pyunicorn.core.network.Network method) nsi_max_neighbors_degree() (pyunicorn.core.network.Network method) nsi_newman_betweenness() (pyunicorn.core.network.Network method) nsi_outdegree() (pyunicorn.core.network.Network method) nsi_spreading() (pyunicorn.core.network.Network method) nsi_transitivity() (pyunicorn.core.network.Network method) nsi_twinness() (pyunicorn.core.network.Network method) number_cross_layer_links() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) number_cross_links() (pyunicorn.core.interacting_networks.InteractingNetworks method) number_internal_links() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) nz_coords() (in module pyunicorn.core.network)

O

observable() (pyunicorn.core.data.Data method) observable_long_name (pyunicorn.core.data.Data attribute) observable_name (pyunicorn.core.data.Data attribute) original_distribution() (pyunicorn.timeseries.surrogates.Surrogates method) outarea_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method) outarea_weighted_connectivity_cumulative_distribution() (pyunicorn.core.geo_network.GeoNetwork method)

outarea_weighted_connectivity_distribution() (pyunicorn.core.geo_network.GeoNetwork method) outaverage_link_distance() (pyunicorn.core.geo_network.GeoNetwork method) outconnectivity_weighted_distance() (pyunicorn.core.geo_network.GeoNetwork method) outdegree() (pyunicorn.core.network.Network method) outdegree_cdf() (pyunicorn.core.network.Network method) outdegree_distribution() (pyunicorn.core.network.Network method) outtotal_link_distance() (pyunicorn.core.geo_network.GeoNetwork method)

P

pagerank() (pyunicorn.core.network.Network method) PartialCorrelationClimateNetwork (class in pyunicorn.climate.partial_correlation) path_lengths() (pyunicorn.core.network.Network method) path_lengths_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) path_lengths_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) permuted_copy() (pyunicorn.core.network.Network method) phase_indices() (pyunicorn.climate.climate_data.ClimateData method) phase_mean() (pyunicorn.climate.climate_data.ClimateData method) phase_shift() (pyunicorn.climate.hilbert.HilbertClimateNetwork method) print_boundaries() (pyunicorn.core.grid.Grid method) print_data_info() (pyunicorn.core.data.Data method) print_grid_size() (pyunicorn.core.grid.Grid method) pyunicorn.climate.climate_data (module) pyunicorn.climate.climate_network (module) pyunicorn.climate.coupled_climate_network (module) pyunicorn.climate.coupled_tsonis (module) pyunicorn.climate.havlin (module) pyunicorn.climate.hilbert (module) pyunicorn.climate.map_plots (module) pyunicorn.climate.mutual_info (module) pyunicorn.climate.partial_correlation (module)

pyunicorn.climate.rainfall (module) pyunicorn.climate.spearman (module) pyunicorn.climate.tsonis (module) pyunicorn.core.data (module) pyunicorn.core.geo_network (module) pyunicorn.core.grid (module) pyunicorn.core.interacting_networks (module) pyunicorn.core.netcdf_dictionary (module) pyunicorn.core.network (module) pyunicorn.core.resistive_network (module) pyunicorn.eventseries.eca (module) pyunicorn.funcnet.coupling_analysis (module) pyunicorn.funcnet.coupling_analysis_pure_python (module) pyunicorn.timeseries.cross_recurrence_plot (module) pyunicorn.timeseries.inter_system_recurrence_network (module) pyunicorn.timeseries.joint_recurrence_network (module) pyunicorn.timeseries.joint_recurrence_plot (module) pyunicorn.timeseries.recurrence_network (module) pyunicorn.timeseries.recurrence_plot (module) pyunicorn.timeseries.surrogates (module) pyunicorn.timeseries.visibility_graph (module) pyunicorn.utils.mpi (module)

R

R (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) RainfallClimateNetwork (class in pyunicorn.climate.rainfall) randomly_rewire() (pyunicorn.core.network.Network method) randomly_rewire_geomodel_I() (pyunicorn.core.geo_network.GeoNetwork method) randomly_rewire_geomodel_II() (pyunicorn.core.geo_network.GeoNetwork method) randomly_rewire_geomodel_III() (pyunicorn.core.geo_network.GeoNetwork method) RandomlyRewireCrossLinks() (pyunicorn.core.interacting_networks.InteractingNetworks static method) RandomlySetCrossLinks() (pyunicorn.core.interacting_networks.InteractingNetworks static method) RandomlySetCrossLinks_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks static method) rank_time_series() (pyunicorn.climate.rainfall.RainfallClimateNetwork static method) (pyunicorn.climate.spearman.SpearmanClimateNetwork static method) recurrence plot RQA time series twins recurrence rate recurrence_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) recurrence_plot() (pyunicorn.timeseries.surrogates.Surrogates method) recurrence_probability() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) recurrence_rate() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)

RecurrenceNetwork (class in pyunicorn.timeseries.recurrence_network) RecurrencePlot (class in pyunicorn.timeseries.recurrence_plot) refined_AAFT_surrogates() (pyunicorn.timeseries.surrogates.Surrogates method) region() (pyunicorn.core.grid.Grid static method) region_indices() (pyunicorn.core.grid.Grid method) RegularGrid() (pyunicorn.core.grid.Grid static method) rejection_sampling() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) resample_diagline_dist() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) resample_vertline_dist() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) rescale() (pyunicorn.core.data.Data static method) ResNetwork (class in pyunicorn.core.resistive_network) resources (pyunicorn.climate.map_plots.MapPlots attribute) retarded_betweenness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) retarded_closeness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) retarded_degree() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) retarded_local_clustering() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) RQA cross recurrence plot determinism joint recurrence plot recurrence plot rqa_summary() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) run() (in module pyunicorn.utils.mpi)

S

save() (pyunicorn.climate.climate_network.ClimateNetwork method) (pyunicorn.core.geo_network.GeoNetwork method) (pyunicorn.core.grid.Grid method) (pyunicorn.core.network.Network method) save_for_cgv() (pyunicorn.core.geo_network.GeoNetwork method) save_ps_map() (pyunicorn.climate.map_plots.MapPlots method) save_txt() (pyunicorn.core.grid.Grid method) set_adaptive_neighborhood_size() (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) set_directed() (pyunicorn.climate.hilbert.HilbertClimateNetwork method) set_edge_list() (pyunicorn.core.network.Network method) set_fixed_local_recurrence_rate() (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) set_fixed_recurrence_rate() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method) (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) set_fixed_threshold() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method) (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) set_fixed_threshold_std() (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method) (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) set_global_window() (pyunicorn.climate.climate_data.ClimateData method) (pyunicorn.core.data.Data method) set_link_attribute() (pyunicorn.core.network.Network method) set_link_density() (pyunicorn.climate.climate_network.ClimateNetwork method) set_max_delay() (pyunicorn.climate.havlin.HavlinClimateNetwork method) set_node_attribute() (pyunicorn.core.network.Network method) set_node_weight_type() (pyunicorn.core.geo_network.GeoNetwork method) set_non_local() (pyunicorn.climate.climate_network.ClimateNetwork method) set_random_links_by_distance() (pyunicorn.core.geo_network.GeoNetwork method) set_silence_level() (pyunicorn.core.data.Data method) set_threshold() (pyunicorn.climate.climate_network.ClimateNetwork method) set_window() (pyunicorn.climate.climate_data.ClimateData method) (pyunicorn.core.data.Data method) set_winter_only() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method)

shuffled_anomaly() (pyunicorn.climate.climate_data.ClimateData method) shuffled_by_distance_copy() (pyunicorn.core.geo_network.GeoNetwork method) shuffled_surrogate_for_cc() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) shuffled_surrogate_for_mi() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) silence_level (pyunicorn.core.data.Data attribute) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) (pyunicorn.timeseries.visibility_graph.VisibilityGraph attribute) similarity_measure() (pyunicorn.climate.climate_network.ClimateNetwork method) similarity_measure_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) similarity_measure_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) sin_lat() (pyunicorn.core.grid.Grid method) sin_lon() (pyunicorn.core.grid.Grid method) SmallComplexNetwork() (pyunicorn.core.resistive_network.ResNetwork static method) SmallDirectedTestNetwork() (pyunicorn.core.interacting_networks.InteractingNetworks static method) (pyunicorn.core.network.Network static method) SmallTestData() (pyunicorn.climate.climate_data.ClimateData static method) (pyunicorn.core.data.Data static method) (pyunicorn.timeseries.surrogates.Surrogates static method) SmallTestGrid() (pyunicorn.core.grid.Grid static method) SmallTestNetwork() (pyunicorn.climate.climate_network.ClimateNetwork static method) (pyunicorn.climate.tsonis.TsonisClimateNetwork static method) (pyunicorn.core.geo_network.GeoNetwork static method) (pyunicorn.core.interacting_networks.InteractingNetworks static method) (pyunicorn.core.network.Network static method) (pyunicorn.core.resistive_network.ResNetwork static method) sp_Aplus() (pyunicorn.core.network.Network method) sp_diag_sqrt_w() (pyunicorn.core.network.Network method) sp_diag_w() (pyunicorn.core.network.Network method) sp_diag_w_inv() (pyunicorn.core.network.Network method) sp_nsi_diag_k() (pyunicorn.core.network.Network method) sp_nsi_diag_k_inv() (pyunicorn.core.network.Network method) sparse_rqa (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) spatio-temporal window, [1] SpearmanClimateNetwork (class in pyunicorn.climate.spearman) splitted_copy() (pyunicorn.core.network.Network method) spreading() (pyunicorn.core.network.Network method) submit_call() (in module pyunicorn.utils.mpi) subnetwork() (pyunicorn.core.interacting_networks.InteractingNetworks method) supremum_distance_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) surrogates twins Surrogates (class in pyunicorn.timeseries.surrogates) symmetrize_by_absmax() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method)

T

terminate() (in module pyunicorn.utils.mpi) test_data() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method) test_mutual_information() (pyunicorn.timeseries.surrogates.Surrogates static method) test_pearson_correlation() (pyunicorn.timeseries.surrogates.Surrogates static method) test_threshold_significance() (pyunicorn.timeseries.surrogates.Surrogates method) threshold() (pyunicorn.climate.climate_network.ClimateNetwork method) threshold_from_link_density() (pyunicorn.climate.climate_network.ClimateNetwork method) threshold_from_recurrence_rate threshold_from_recurrence_rate() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) threshold_from_recurrence_rate_fast() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) time series recurrence plot time series normalize time series array normalize, [1] time_cycle (pyunicorn.climate.climate_data.ClimateData attribute) time_series (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) (pyunicorn.timeseries.visibility_graph.VisibilityGraph attribute)

time_surrogate_for_cc() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) time_surrogate_for_mi() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) timings (pyunicorn.timeseries.visibility_graph.VisibilityGraph attribute) title (pyunicorn.climate.map_plots.MapPlots attribute) to_file() (pyunicorn.core.netcdf_dictionary.NetCDFDictionary method) total_link_distance() (pyunicorn.core.geo_network.GeoNetwork method) trans_betweenness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) transitivity() (pyunicorn.core.network.Network method) transitivity_dim_single_scale() (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) trapping time trapping_time() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) TsonisClimateNetwork (class in pyunicorn.climate.tsonis) twin surrogate twin_surrogates() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) (pyunicorn.timeseries.surrogates.Surrogates method) twins recurrence plot surrogates twins() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) (pyunicorn.timeseries.surrogates.Surrogates method)

U

undirected_adjacency() (pyunicorn.core.network.Network method) undirected_copy() (pyunicorn.core.network.Network method)

update_admittance() (pyunicorn.core.resistive_network.ResNetwork method) update_R() (pyunicorn.core.resistive_network.ResNetwork method) update_resistances() (pyunicorn.core.resistive_network.ResNetwork method)

V

vert_entropy() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) vertex_current_flow_betweenness() (pyunicorn.core.resistive_network.ResNetwork method) vertical line entropy line length, average line length, frequency distribution line length, maximum lines

vertline_dist() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) visibility() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) visibility_horizontal() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) visibility_horizontal_single() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) visibility_relations() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) visibility_relations_horizontal() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) visibility_single() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) VisibilityGraph (class in pyunicorn.timeseries.visibility_graph)

W

WattsStrogatzGraph() (pyunicorn.core.network.Network static method) weighted_local_clustering() (pyunicorn.core.network.Network static method) white vertical line entropy line length, average line length, frequency distribution line length, maximum lines

white_noise_surrogates() (pyunicorn.timeseries.surrogates.Surrogates method) white_vert_entropy() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) white_vertline_dist() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) window() (pyunicorn.core.data.Data method) winter_only() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method)

X

x (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

x_embedded (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

Y

y (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

y_embedded (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

Z

zero padded data

zero_pad_data() (pyunicorn.core.data.Data static method)