Index

_ | A | B | C | D | E | F | G | H | I | J | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z

_

__init__() (pyunicorn.climate.climate_data.ClimateData method)
(pyunicorn.climate.climate_network.ClimateNetwork method)
(pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method)
(pyunicorn.climate.havlin.HavlinClimateNetwork method)
(pyunicorn.climate.hilbert.HilbertClimateNetwork method)
(pyunicorn.climate.map_plots.MapPlots method)
(pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)
(pyunicorn.climate.partial_correlation.PartialCorrelationClimateNetwork method)
(pyunicorn.climate.rainfall.RainfallClimateNetwork method)
(pyunicorn.climate.spearman.SpearmanClimateNetwork method)
(pyunicorn.climate.tsonis.TsonisClimateNetwork method)
(pyunicorn.core.data.Data method)
(pyunicorn.core.geo_network.GeoNetwork method)
(pyunicorn.core.grid.Grid method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
(pyunicorn.core.netcdf_dictionary.NetCDFDictionary method)
(pyunicorn.core.network.Network method)
(pyunicorn.core.resistive_network.ResNetwork method)
(pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method)
(pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)
(pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method)
(pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method)
(pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method)
(pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method)
(pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
(pyunicorn.timeseries.surrogates.Surrogates method)
(pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
__len__() (pyunicorn.core.network.Network method)
__str__() (pyunicorn.climate.climate_data.ClimateData method)
(pyunicorn.climate.climate_network.ClimateNetwork method)
(pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method)
(pyunicorn.climate.havlin.HavlinClimateNetwork method)
(pyunicorn.climate.hilbert.HilbertClimateNetwork method)
(pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)
(pyunicorn.climate.partial_correlation.PartialCorrelationClimateNetwork method)
(pyunicorn.climate.rainfall.RainfallClimateNetwork method)
(pyunicorn.climate.spearman.SpearmanClimateNetwork method)
(pyunicorn.climate.tsonis.TsonisClimateNetwork method)
(pyunicorn.core.data.Data method)
(pyunicorn.core.geo_network.GeoNetwork method)
(pyunicorn.core.grid.Grid method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
(pyunicorn.core.netcdf_dictionary.NetCDFDictionary method)
(pyunicorn.core.network.Network method)
(pyunicorn.core.resistive_network.ResNetwork method)
(pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method)
(pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)
(pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method)
(pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method)
(pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method)
(pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method)
(pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
(pyunicorn.timeseries.surrogates.Surrogates method)
(pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
__weakref__ (pyunicorn.climate.map_plots.MapPlots attribute)
(pyunicorn.core.data.Data attribute)
(pyunicorn.core.grid.Grid attribute)
(pyunicorn.core.netcdf_dictionary.NetCDFDictionary attribute)
(pyunicorn.core.network.Network attribute)
(pyunicorn.core.network.NetworkError attribute)
(pyunicorn.funcnet.coupling_analysis.CouplingAnalysis attribute)
(pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython attribute)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute)
(pyunicorn.timeseries.surrogates.Surrogates attribute)
_calculate_angular_distance() (pyunicorn.core.grid.Grid method)
_calculate_anomaly() (pyunicorn.climate.climate_data.ClimateData method)
_calculate_cc() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)
_calculate_correlation() (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method)
(pyunicorn.climate.partial_correlation.PartialCorrelationClimateNetwork method)
(pyunicorn.climate.rainfall.RainfallClimateNetwork method)
(pyunicorn.climate.spearman.SpearmanClimateNetwork method)
(pyunicorn.climate.tsonis.TsonisClimateNetwork method)
_calculate_correlation_strength() (pyunicorn.climate.havlin.HavlinClimateNetwork method)
_calculate_general_average_link_distance() (pyunicorn.core.geo_network.GeoNetwork method)
_calculate_general_average_path_length() (pyunicorn.core.interacting_networks.InteractingNetworks static method)
_calculate_general_closeness() (pyunicorn.core.interacting_networks.InteractingNetworks method)
_calculate_general_connectivity_weighted_distance() (pyunicorn.core.geo_network.GeoNetwork method)
_calculate_hilbert_correlation() (pyunicorn.climate.hilbert.HilbertClimateNetwork method)
_calculate_mi() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)
_calculate_mutual_information() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)
_calculate_non_local_adjacency() (pyunicorn.climate.climate_network.ClimateNetwork method)
_calculate_phase_mean() (pyunicorn.climate.climate_data.ClimateData method)
_calculate_threshold_adjacency() (pyunicorn.climate.climate_network.ClimateNetwork method)
_cum_histogram() (pyunicorn.core.network.Network static method)
_edge_current_flow_betweenness_python() (pyunicorn.core.resistive_network.ResNetwork method)
_edge_current_flow_betweenness_weave() (pyunicorn.core.resistive_network.ResNetwork method)
_eigenvector_centrality_slow() (pyunicorn.core.network.Network method)
_get_nearest_neighbors() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method)
_get_netcdf_data() (pyunicorn.core.data.Data class method)
_histogram() (pyunicorn.core.network.Network static method)
_load_data() (pyunicorn.core.data.Data class method)
_par_corr_to_cmi() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method)
_quantile_bin_array() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method)
_regenerate_network() (pyunicorn.climate.climate_network.ClimateNetwork method)
_set_adjacency() (pyunicorn.core.network.Network method)
_set_directed() (pyunicorn.climate.hilbert.HilbertClimateNetwork method)
_set_max_delay() (pyunicorn.climate.havlin.HavlinClimateNetwork method)
_set_node_weights() (pyunicorn.core.network.Network method)
_set_winter_only() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)
(pyunicorn.climate.tsonis.TsonisClimateNetwork method)
_vertex_current_flow_betweenness_python() (pyunicorn.core.resistive_network.ResNetwork method)
_vertex_current_flow_betweenness_weave() (pyunicorn.core.resistive_network.ResNetwork method)
_weave_calculate_mutual_information() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)

A

AAFT_surrogates() (pyunicorn.timeseries.surrogates.Surrogates method)
abort() (in module pyunicorn.utils.mpi)
adaptive neighborhood size
recurrence network
recurrence plot
add_dataset() (pyunicorn.climate.map_plots.MapPlots method)
add_multiple_datasets() (pyunicorn.climate.map_plots.MapPlots method)
add_multiple_datasets_npy() (pyunicorn.climate.map_plots.MapPlots method)
adjacency (pyunicorn.core.network.Network attribute)
adjacency_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
adjacency_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
admittance_lapacian() (pyunicorn.core.resistive_network.ResNetwork method)
admittive_degree() (pyunicorn.core.resistive_network.ResNetwork method)
advanced_betweenness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
advanced_closeness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
advanced_degree() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
advanced_local_clustering() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
am_master (in module pyunicorn.utils.mpi)
am_slave (in module pyunicorn.utils.mpi)
angular_distance() (pyunicorn.core.geo_network.GeoNetwork method)
(pyunicorn.core.grid.Grid method)
anomaly() (pyunicorn.climate.climate_data.ClimateData method)
anomaly_selected_months() (pyunicorn.climate.climate_data.ClimateData method)
area_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method)
area_weighted_connectivity_cumulative_distribution() (pyunicorn.core.geo_network.GeoNetwork method)
area_weighted_connectivity_distribution() (pyunicorn.core.geo_network.GeoNetwork method)
arenas_betweenness() (pyunicorn.core.network.Network method)
assigned (in module pyunicorn.utils.mpi)
assortativity() (pyunicorn.core.network.Network method)
available (in module pyunicorn.utils.mpi)
average
diagonal line length
vertical line length
white vertical line length
average_diaglength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
average_distance_weighted_path_length() (pyunicorn.core.geo_network.GeoNetwork method)
average_effective_resistance() (pyunicorn.core.resistive_network.ResNetwork method)
average_link_attribute() (pyunicorn.core.network.Network method)
average_link_distance() (pyunicorn.core.geo_network.GeoNetwork method)
average_neighbor_area_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method)
average_neighbors_admittive_degree() (pyunicorn.core.resistive_network.ResNetwork method)
average_neighbors_degree() (pyunicorn.core.network.Network method)
average_path_length() (pyunicorn.core.network.Network method)
average_vertlength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
average_white_vertlength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)

B

balance() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method)
BarabasiAlbert() (pyunicorn.core.geo_network.GeoNetwork static method)
(pyunicorn.core.network.Network static method)
BarabasiAlbert_igraph() (pyunicorn.core.network.Network static method)
betweenness() (pyunicorn.core.network.Network method)
bincount_hist() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method)
bootstrap_distance_matrix() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method)
boundaries() (pyunicorn.core.grid.Grid method)
boundary() (pyunicorn.core.geo_network.GeoNetwork method)
boundary_corrected_closeness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
boundary_corrected_degree() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)

C

cache (pyunicorn.core.network.Network attribute)
cache_helper() (in module pyunicorn.core.network)
cached_const() (in module pyunicorn.core.network)
cached_var() (in module pyunicorn.core.network)
calculate_corr() (pyunicorn.climate.rainfall.RainfallClimateNetwork method)
calculate_rainfall() (pyunicorn.climate.rainfall.RainfallClimateNetwork static method)
calculate_similarity_measure() (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method)
(pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)
(pyunicorn.climate.tsonis.TsonisClimateNetwork method)
calculate_top_events() (pyunicorn.climate.rainfall.RainfallClimateNetwork static method)
clear_cache() (pyunicorn.climate.climate_data.ClimateData method)
(pyunicorn.climate.climate_network.ClimateNetwork method)
(pyunicorn.climate.havlin.HavlinClimateNetwork method)
(pyunicorn.climate.hilbert.HilbertClimateNetwork method)
(pyunicorn.core.data.Data method)
(pyunicorn.core.geo_network.GeoNetwork method)
(pyunicorn.core.grid.Grid method)
(pyunicorn.core.network.Network method)
(pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method)
(pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method)
(pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
(pyunicorn.timeseries.surrogates.Surrogates method)
clear_link_attribute() (pyunicorn.core.network.Network method)
clear_nsi_cache() (pyunicorn.core.network.Network method)
clear_paths_cache() (pyunicorn.core.network.Network method)
ClimateData (class in pyunicorn.climate.climate_data)
ClimateNetwork (class in pyunicorn.climate.climate_network)
closeness() (pyunicorn.core.network.Network method)
coherence() (pyunicorn.climate.hilbert.HilbertClimateNetwork method)
ConfigurationModel() (pyunicorn.core.geo_network.GeoNetwork static method)
(pyunicorn.core.network.Network static method)
connectivity_weighted_distance() (pyunicorn.core.geo_network.GeoNetwork method)
convert_lon_coordinates() (pyunicorn.core.grid.Grid method)
coord_sequence_from_rect_grid() (pyunicorn.core.grid.Grid static method)
copy() (pyunicorn.core.network.Network method)
coreness() (pyunicorn.core.network.Network method)
correlated_noise_surrogates() (pyunicorn.timeseries.surrogates.Surrogates method)
correlatedNoiseSurrogates() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)
correlation() (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method)
(pyunicorn.climate.tsonis.TsonisClimateNetwork method)
correlation_distance() (pyunicorn.climate.climate_network.ClimateNetwork method)
correlation_distance_weighted_closeness() (pyunicorn.climate.climate_network.ClimateNetwork method)
correlation_lag() (pyunicorn.climate.havlin.HavlinClimateNetwork method)
correlation_lag_weighted_average_path_length() (pyunicorn.climate.havlin.HavlinClimateNetwork method)
correlation_lag_weighted_closeness() (pyunicorn.climate.havlin.HavlinClimateNetwork method)
correlation_strength() (pyunicorn.climate.havlin.HavlinClimateNetwork method)
correlation_strength_weighted_average_path_length() (pyunicorn.climate.havlin.HavlinClimateNetwork method)
correlation_strength_weighted_closeness() (pyunicorn.climate.havlin.HavlinClimateNetwork method)
correlation_weighted_average_path_length() (pyunicorn.climate.tsonis.TsonisClimateNetwork method)
correlation_weighted_closeness() (pyunicorn.climate.tsonis.TsonisClimateNetwork method)
cos_lat() (pyunicorn.core.grid.Grid method)
cos_lon() (pyunicorn.core.grid.Grid method)
cos_window() (pyunicorn.core.data.Data static method)
CoupledClimateNetwork (class in pyunicorn.climate.coupled_climate_network)
CoupledTsonisClimateNetwork (class in pyunicorn.climate.coupled_tsonis)
CouplingAnalysis (class in pyunicorn.funcnet.coupling_analysis)
CouplingAnalysisPurePython (class in pyunicorn.funcnet.coupling_analysis_pure_python)
CR (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute)
create_plogp() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method)
cross recurrence plot
RQA
cross_adjacency() (pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_adjacency_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_average_path_length() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_betweenness() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_closeness() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_correlation() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method)
(pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)
cross_degree() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_global_clustering() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_global_clustering_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_global_clustering_xy() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method)
cross_global_clustering_yx() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method)
cross_layer_adjacency() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
cross_link_density() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_local_clustering() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_local_clustering_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_path_lengths() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_recurrence_rate() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method)
(pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method)
cross_similarity_measure() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
cross_transitivity() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_transitivity_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks method)
cross_transitivity_xy() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method)
cross_transitivity_yx() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method)
CrossRecurrencePlot (class in pyunicorn.timeseries.cross_recurrence_plot)

D

Data (class in pyunicorn.core.data)
data (pyunicorn.climate.havlin.HavlinClimateNetwork attribute)
(pyunicorn.climate.hilbert.HilbertClimateNetwork attribute)
(pyunicorn.climate.mutual_info.MutualInfoClimateNetwork attribute)
(pyunicorn.climate.rainfall.RainfallClimateNetwork attribute)
(pyunicorn.climate.tsonis.TsonisClimateNetwork attribute)
degree() (pyunicorn.core.network.Network method)
degree_cdf() (pyunicorn.core.network.Network method)
degree_distribution() (pyunicorn.core.network.Network method)
del_link_attribute() (pyunicorn.core.network.Network method)
del_node_attribute() (pyunicorn.core.network.Network method)
delay embedding
determinism
RQA
determinism() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
diag_entropy() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
diagline_dist() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
diagonal
line entropy
line length, average
line length, frequency distribution
line length, maximum
lines
diameter() (pyunicorn.core.network.Network method)
diameter_effective_resistance() (pyunicorn.core.resistive_network.ResNetwork method)
directed (pyunicorn.core.network.Network attribute)
distance_based_measures() (pyunicorn.core.network.Network method)
distance_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
distance_weighted_closeness() (pyunicorn.core.geo_network.GeoNetwork method)
do_nsi_clustering() (pyunicorn.core.network.Network method)
do_nsi_hamming_clustering() (pyunicorn.core.network.Network method)
do_nsi_pca_clustering() (pyunicorn.core.network.Network method)

E

edge_betweenness() (pyunicorn.core.network.Network method)
edge_current_flow_betweenness() (pyunicorn.core.resistive_network.ResNetwork method)
edge_list() (pyunicorn.core.network.Network method)
effective_resistance() (pyunicorn.core.resistive_network.ResNetwork method)
effective_resistance_closeness_centrality() (pyunicorn.core.resistive_network.ResNetwork method)
eigenvector_centrality() (pyunicorn.core.network.Network method)
embed_time_series() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method)
embed_time_series_array() (pyunicorn.timeseries.surrogates.Surrogates method)
embedding (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute)
ErdosRenyi() (pyunicorn.core.geo_network.GeoNetwork static method)
(pyunicorn.core.network.Network static method)
euclidean_distance() (pyunicorn.core.grid.Grid method)
euclidean_distance_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
eval_fast_code() (pyunicorn.timeseries.surrogates.Surrogates static method)
eval_weave_calculate_mutual_information() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)

F

frequency distribution
diagonal line length
vertical line length
white vertical line length
from_file() (pyunicorn.core.netcdf_dictionary.NetCDFDictionary static method)
FromIGraph() (pyunicorn.core.network.Network static method)

G

generate_map_plots() (pyunicorn.climate.map_plots.MapPlots method)
generate_multiple_map_plots() (pyunicorn.climate.map_plots.MapPlots method)
generate_multiple_map_plots_npy() (pyunicorn.climate.map_plots.MapPlots method)
geographical_cumulative_distribution() (pyunicorn.core.geo_network.GeoNetwork method)
geographical_distribution() (pyunicorn.core.geo_network.GeoNetwork method)
geometric_distance_distribution() (pyunicorn.core.grid.Grid method)
GeoNetwork (class in pyunicorn.core.geo_network)
get_admittance() (pyunicorn.core.resistive_network.ResNetwork method)
get_max_delay() (pyunicorn.climate.havlin.HavlinClimateNetwork method)
get_next_result() (in module pyunicorn.utils.mpi)
get_R() (pyunicorn.core.resistive_network.ResNetwork method)
get_result() (in module pyunicorn.utils.mpi)
global_admittive_clustering() (pyunicorn.core.resistive_network.ResNetwork method)
global_clustering() (pyunicorn.core.network.Network method)
global_efficiency() (pyunicorn.core.network.Network method)
graph (pyunicorn.core.network.Network attribute)
Grid (class in pyunicorn.core.grid)
grid (pyunicorn.climate.map_plots.MapPlots attribute)
(pyunicorn.core.data.Data attribute)
(pyunicorn.core.geo_network.GeoNetwork attribute)
grid() (pyunicorn.core.grid.Grid method)
grid_1 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute)
grid_2 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute)
grid_size() (pyunicorn.core.grid.Grid method)
GrowPreferentially() (pyunicorn.core.network.Network static method)
GrowPreferentially_old() (pyunicorn.core.network.Network static method)
GrowWeights() (pyunicorn.core.network.Network static method)

H

hamming_distance_from() (pyunicorn.core.network.Network method)
HavlinClimateNetwork (class in pyunicorn.climate.havlin)
higher_order_transitivity() (pyunicorn.core.network.Network method)
HilbertClimateNetwork (class in pyunicorn.climate.hilbert)

I

inarea_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method)
inarea_weighted_connectivity_cumulative_distribution() (pyunicorn.core.geo_network.GeoNetwork method)
inarea_weighted_connectivity_distribution() (pyunicorn.core.geo_network.GeoNetwork method)
inaverage_link_distance() (pyunicorn.core.geo_network.GeoNetwork method)
inconnectivity_weighted_distance() (pyunicorn.core.geo_network.GeoNetwork method)
indegree() (pyunicorn.core.network.Network method)
indegree_cdf() (pyunicorn.core.network.Network method)
indegree_distribution() (pyunicorn.core.network.Network method)
indices_selected_months() (pyunicorn.climate.climate_data.ClimateData method)
indices_selected_phases() (pyunicorn.climate.climate_data.ClimateData method)
info() (in module pyunicorn.utils.mpi)
information_transfer() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method)
inter_system_recurrence_matrix() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method)
InteractingNetworks (class in pyunicorn.core.interacting_networks)
internal_adjacency() (pyunicorn.core.interacting_networks.InteractingNetworks method)
internal_average_path_length() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
internal_betweenness() (pyunicorn.core.interacting_networks.InteractingNetworks method)
internal_betweenness_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
internal_betweenness_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
internal_closeness() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
internal_degree() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
internal_global_clustering() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
internal_link_density() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
internal_path_lengths() (pyunicorn.core.interacting_networks.InteractingNetworks method)
internal_recurrence_rates() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method)
interregional_betweenness() (pyunicorn.core.network.Network method)
InterSystemRecurrenceNetwork (class in pyunicorn.timeseries.inter_system_recurrence_network)
intotal_link_distance() (pyunicorn.core.geo_network.GeoNetwork method)
inv_correlation_distance() (pyunicorn.climate.climate_network.ClimateNetwork method)

J

joint recurrence plot
RQA
JointRecurrenceNetwork (class in pyunicorn.timeseries.joint_recurrence_network)
JointRecurrencePlot (class in pyunicorn.timeseries.joint_recurrence_plot)
JR (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

L

lag (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)
laminarity
laminarity() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
laplacian() (pyunicorn.core.network.Network method)
lat_sequence() (pyunicorn.core.grid.Grid method)
legendre_coordinates() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method)
line entropy
diagonal
vertical
white vertical
line length
average diagonal
average vertical
average white vertical
frequency distribution diagonal
frequency distribution vertical
frequency distribution white vertical
maximum diagonal
maximum vertical
maximum white vertical
lines
diagonal
vertical
white vertical
link_attribute() (pyunicorn.core.network.Network method)
link_betweenness() (pyunicorn.core.network.Network method)
link_density (pyunicorn.core.network.Network attribute)
link_density_function() (pyunicorn.climate.climate_network.ClimateNetwork method)
link_distance_distribution() (pyunicorn.core.geo_network.GeoNetwork method)
Load() (pyunicorn.climate.climate_data.ClimateData class method)
(pyunicorn.climate.climate_network.ClimateNetwork static method)
(pyunicorn.core.data.Data class method)
(pyunicorn.core.geo_network.GeoNetwork static method)
(pyunicorn.core.grid.Grid static method)
(pyunicorn.core.network.Network static method)
LoadTXT() (pyunicorn.core.grid.Grid static method)
local_admittive_clustering() (pyunicorn.core.resistive_network.ResNetwork method)
local_cliquishness() (pyunicorn.core.network.Network method)
local_clustering() (pyunicorn.core.network.Network method)
local_clustering_dim_single_scale() (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method)
local_correlation_distance_weighted_vulnerability() (pyunicorn.climate.climate_network.ClimateNetwork method)
local_correlation_lag_weighted_vulnerability() (pyunicorn.climate.havlin.HavlinClimateNetwork method)
local_correlation_strength_weighted_vulnerability() (pyunicorn.climate.havlin.HavlinClimateNetwork method)
local_correlation_weighted_vulnerability() (pyunicorn.climate.tsonis.TsonisClimateNetwork method)
local_distance_weighted_vulnerability() (pyunicorn.core.geo_network.GeoNetwork method)
local_geographical_clustering() (pyunicorn.core.geo_network.GeoNetwork method)
local_mutual_information_weighted_vulnerability() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)
local_tsonis_clustering() (pyunicorn.core.geo_network.GeoNetwork method)
local_vulnerability() (pyunicorn.core.network.Network method)
lon_sequence() (pyunicorn.core.grid.Grid method)

M

M (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute)
manhattan_distance_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
map_data (pyunicorn.climate.map_plots.MapPlots attribute)
map_mult_data (pyunicorn.climate.map_plots.MapPlots attribute)
MapPlots (class in pyunicorn.climate.map_plots)
matching_index() (pyunicorn.core.network.Network method)
max_diaglength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
max_link_distance() (pyunicorn.core.geo_network.GeoNetwork method)
max_neighbor_area_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method)
max_neighbors_degree() (pyunicorn.core.network.Network method)
max_vertlength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
max_white_vertlength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
maximum
diagonal line length
vertical line length
white vertical line length
mean recurrence time
mean_node_weight (pyunicorn.core.network.Network attribute)
mean_recurrence_time() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
metric (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute)
mi_file (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork attribute)
missing_values (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute)
(pyunicorn.timeseries.visibility_graph.VisibilityGraph attribute)
msf_synchronizability() (pyunicorn.core.network.Network method)
mutual_information() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)
(pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method)
(pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)
mutual_information_edges() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)
mutual_information_weighted_average_path_length() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)
mutual_information_weighted_closeness() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)
MutualInfoClimateNetwork (class in pyunicorn.climate.mutual_info)

N

N (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute)
(pyunicorn.core.grid.Grid attribute)
(pyunicorn.core.network.Network attribute)
(pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute)
(pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute)
(pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute)
N_1 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute)
N_2 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute)
n_grid_points (pyunicorn.core.grid.Grid attribute)
n_links (pyunicorn.core.network.Network attribute)
n_processed (in module pyunicorn.utils.mpi)
n_slaves (in module pyunicorn.utils.mpi)
N_x (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute)
N_y (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute)
NetCDFDictionary (class in pyunicorn.core.netcdf_dictionary)
Network (class in pyunicorn.core.network)
network_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
network_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
NetworkError
newman_betweenness() (pyunicorn.core.network.Network method)
next_power_2() (pyunicorn.core.data.Data static method)
node_attribute() (pyunicorn.core.network.Network method)
node_coordinates() (pyunicorn.core.grid.Grid method)
node_number() (pyunicorn.core.grid.Grid method)
node_weights (pyunicorn.core.network.Network attribute)
nodes_1 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute)
nodes_2 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute)
non_local() (pyunicorn.climate.climate_network.ClimateNetwork method)
normalize
time series
time series array, [1]
normalize_time_series() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method)
normalize_time_series_array() (pyunicorn.core.data.Data static method)
(pyunicorn.timeseries.surrogates.Surrogates static method)
nsi_arenas_betweenness() (pyunicorn.core.network.Network method)
nsi_average_neighbors_degree() (pyunicorn.core.network.Network method)
nsi_average_path_length() (pyunicorn.core.network.Network method)
nsi_betweenness() (pyunicorn.core.network.Network method)
nsi_closeness() (pyunicorn.core.network.Network method)
nsi_connected_hamming_cluster_tree() (pyunicorn.core.geo_network.GeoNetwork method)
nsi_cross_average_path_length() (pyunicorn.core.interacting_networks.InteractingNetworks method)
nsi_cross_betweenness() (pyunicorn.core.interacting_networks.InteractingNetworks method)
nsi_cross_closeness_centrality() (pyunicorn.core.interacting_networks.InteractingNetworks method)
nsi_cross_degree() (pyunicorn.core.interacting_networks.InteractingNetworks method)
nsi_cross_edge_density() (pyunicorn.core.interacting_networks.InteractingNetworks method)
nsi_cross_global_clustering() (pyunicorn.core.interacting_networks.InteractingNetworks method)
nsi_cross_local_clustering() (pyunicorn.core.interacting_networks.InteractingNetworks method)
nsi_cross_mean_degree() (pyunicorn.core.interacting_networks.InteractingNetworks method)
nsi_cross_transitivity() (pyunicorn.core.interacting_networks.InteractingNetworks method)
nsi_degree() (pyunicorn.core.network.Network method)
nsi_degree_cumulative_histogram() (pyunicorn.core.network.Network method)
nsi_degree_histogram() (pyunicorn.core.network.Network method)
nsi_degree_uncorr() (pyunicorn.core.network.Network method)
nsi_eigenvector_centrality() (pyunicorn.core.network.Network method)
nsi_exponential_closeness() (pyunicorn.core.network.Network method)
nsi_global_clustering() (pyunicorn.core.network.Network method)
nsi_global_efficiency() (pyunicorn.core.network.Network method)
nsi_harmonic_closeness() (pyunicorn.core.network.Network method)
nsi_internal_closeness_centrality() (pyunicorn.core.interacting_networks.InteractingNetworks method)
nsi_internal_degree() (pyunicorn.core.interacting_networks.InteractingNetworks method)
nsi_internal_local_clustering() (pyunicorn.core.interacting_networks.InteractingNetworks method)
nsi_interregional_betweenness() (pyunicorn.core.network.Network method)
nsi_laplacian() (pyunicorn.core.network.Network method)
nsi_local_clustering() (pyunicorn.core.network.Network method)
nsi_local_clustering_uncorr() (pyunicorn.core.network.Network method)
nsi_local_soffer_clustering() (pyunicorn.core.network.Network method)
nsi_max_neighbors_degree() (pyunicorn.core.network.Network method)
nsi_newman_betweenness() (pyunicorn.core.network.Network method)
nsi_spreading() (pyunicorn.core.network.Network method)
nsi_transitivity() (pyunicorn.core.network.Network method)
nsi_twinness() (pyunicorn.core.network.Network method)
number_cross_layer_links() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
number_cross_links() (pyunicorn.core.interacting_networks.InteractingNetworks method)
number_internal_links() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
(pyunicorn.core.interacting_networks.InteractingNetworks method)
nz_coords() (in module pyunicorn.core.network)

O

observable() (pyunicorn.core.data.Data method)
observable_long_name (pyunicorn.core.data.Data attribute)
observable_name (pyunicorn.core.data.Data attribute)
original_data (pyunicorn.timeseries.surrogates.Surrogates attribute)
original_distribution() (pyunicorn.timeseries.surrogates.Surrogates method)
outarea_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method)
outarea_weighted_connectivity_cumulative_distribution() (pyunicorn.core.geo_network.GeoNetwork method)
outarea_weighted_connectivity_distribution() (pyunicorn.core.geo_network.GeoNetwork method)
outaverage_link_distance() (pyunicorn.core.geo_network.GeoNetwork method)
outconnectivity_weighted_distance() (pyunicorn.core.geo_network.GeoNetwork method)
outdegree() (pyunicorn.core.network.Network method)
outdegree_cdf() (pyunicorn.core.network.Network method)
outdegree_distribution() (pyunicorn.core.network.Network method)
outtotal_link_distance() (pyunicorn.core.geo_network.GeoNetwork method)

P

pagerank() (pyunicorn.core.network.Network method)
PartialCorrelationClimateNetwork (class in pyunicorn.climate.partial_correlation)
path_lengths() (pyunicorn.core.network.Network method)
path_lengths_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
path_lengths_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
permuted_copy() (pyunicorn.core.network.Network method)
phase_indices() (pyunicorn.climate.climate_data.ClimateData method)
phase_mean() (pyunicorn.climate.climate_data.ClimateData method)
phase_shift() (pyunicorn.climate.hilbert.HilbertClimateNetwork method)
print_boundaries() (pyunicorn.core.grid.Grid method)
print_data_info() (pyunicorn.core.data.Data method)
print_grid_size() (pyunicorn.core.grid.Grid method)
pyunicorn.climate.climate_data (module)
pyunicorn.climate.climate_network (module)
pyunicorn.climate.coupled_climate_network (module)
pyunicorn.climate.coupled_tsonis (module)
pyunicorn.climate.havlin (module)
pyunicorn.climate.hilbert (module)
pyunicorn.climate.map_plots (module)
pyunicorn.climate.mutual_info (module)
pyunicorn.climate.partial_correlation (module)
pyunicorn.climate.rainfall (module)
pyunicorn.climate.spearman (module)
pyunicorn.climate.tsonis (module)
pyunicorn.core.data (module)
pyunicorn.core.geo_network (module)
pyunicorn.core.grid (module)
pyunicorn.core.interacting_networks (module)
pyunicorn.core.netcdf_dictionary (module)
pyunicorn.core.network (module)
pyunicorn.core.resistive_network (module)
pyunicorn.funcnet.coupling_analysis (module)
pyunicorn.funcnet.coupling_analysis_pure_python (module)
pyunicorn.timeseries.cross_recurrence_plot (module)
pyunicorn.timeseries.inter_system_recurrence_network (module)
pyunicorn.timeseries.joint_recurrence_network (module)
pyunicorn.timeseries.joint_recurrence_plot (module)
pyunicorn.timeseries.recurrence_network (module)
pyunicorn.timeseries.recurrence_plot (module)
pyunicorn.timeseries.surrogates (module)
pyunicorn.timeseries.visibility_graph (module)
pyunicorn.utils.mpi (module)

Q

queue (in module pyunicorn.utils.mpi)

R

R (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute)
RainfallClimateNetwork (class in pyunicorn.climate.rainfall)
randomly_rewire() (pyunicorn.core.network.Network method)
randomly_rewire_geomodel_I() (pyunicorn.core.geo_network.GeoNetwork method)
randomly_rewire_geomodel_II() (pyunicorn.core.geo_network.GeoNetwork method)
randomly_rewire_geomodel_III() (pyunicorn.core.geo_network.GeoNetwork method)
RandomlyRewireCrossLinks() (pyunicorn.core.interacting_networks.InteractingNetworks static method)
RandomlySetCrossLinks() (pyunicorn.core.interacting_networks.InteractingNetworks static method)
RandomlySetCrossLinks_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks static method)
rank (in module pyunicorn.utils.mpi)
rank_time_series() (pyunicorn.climate.rainfall.RainfallClimateNetwork static method)
(pyunicorn.climate.spearman.SpearmanClimateNetwork static method)
recurrence plot
RQA
time series
twins
recurrence rate
recurrence_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method)
(pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
recurrence_plot() (pyunicorn.timeseries.surrogates.Surrogates method)
recurrence_probability() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
recurrence_rate() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
RecurrenceNetwork (class in pyunicorn.timeseries.recurrence_network)
RecurrencePlot (class in pyunicorn.timeseries.recurrence_plot)
refined_AAFT_surrogates() (pyunicorn.timeseries.surrogates.Surrogates method)
region() (pyunicorn.core.grid.Grid static method)
region_indices() (pyunicorn.core.grid.Grid method)
RegularGrid() (pyunicorn.core.grid.Grid static method)
rejection_sampling() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method)
resample_diagline_dist() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
resample_vertline_dist() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
rescale() (pyunicorn.core.data.Data static method)
ResNetwork (class in pyunicorn.core.resistive_network)
resources (pyunicorn.climate.map_plots.MapPlots attribute)
results (in module pyunicorn.utils.mpi)
retarded_betweenness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
retarded_closeness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
retarded_degree() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
retarded_local_clustering() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
RQA
cross recurrence plot
determinism
joint recurrence plot
recurrence plot
rqa_summary() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
run() (in module pyunicorn.utils.mpi)

S

save() (pyunicorn.climate.climate_network.ClimateNetwork method)
(pyunicorn.core.geo_network.GeoNetwork method)
(pyunicorn.core.grid.Grid method)
(pyunicorn.core.network.Network method)
save_for_cgv() (pyunicorn.core.geo_network.GeoNetwork method)
save_ps_map() (pyunicorn.climate.map_plots.MapPlots method)
save_txt() (pyunicorn.core.grid.Grid method)
set_adaptive_neighborhood_size() (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
set_directed() (pyunicorn.climate.hilbert.HilbertClimateNetwork method)
set_edge_list() (pyunicorn.core.network.Network method)
set_fixed_local_recurrence_rate() (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
set_fixed_recurrence_rate() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method)
(pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method)
(pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method)
(pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method)
(pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
set_fixed_threshold() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method)
(pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method)
(pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method)
(pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method)
(pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
set_fixed_threshold_std() (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method)
(pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method)
(pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
set_global_window() (pyunicorn.climate.climate_data.ClimateData method)
(pyunicorn.core.data.Data method)
set_link_attribute() (pyunicorn.core.network.Network method)
set_link_density() (pyunicorn.climate.climate_network.ClimateNetwork method)
set_max_delay() (pyunicorn.climate.havlin.HavlinClimateNetwork method)
set_node_attribute() (pyunicorn.core.network.Network method)
set_node_weight_type() (pyunicorn.core.geo_network.GeoNetwork method)
set_non_local() (pyunicorn.climate.climate_network.ClimateNetwork method)
set_random_links_by_distance() (pyunicorn.core.geo_network.GeoNetwork method)
set_silence_level() (pyunicorn.core.data.Data method)
set_threshold() (pyunicorn.climate.climate_network.ClimateNetwork method)
set_window() (pyunicorn.climate.climate_data.ClimateData method)
(pyunicorn.core.data.Data method)
set_winter_only() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)
(pyunicorn.climate.tsonis.TsonisClimateNetwork method)
shuffled_anomaly() (pyunicorn.climate.climate_data.ClimateData method)
shuffled_by_distance_copy() (pyunicorn.core.geo_network.GeoNetwork method)
shuffled_surrogate_for_cc() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)
shuffled_surrogate_for_mi() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)
silence_level (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork attribute)
(pyunicorn.core.data.Data attribute)
(pyunicorn.core.grid.Grid attribute)
(pyunicorn.core.netcdf_dictionary.NetCDFDictionary attribute)
(pyunicorn.core.network.Network attribute)
(pyunicorn.funcnet.coupling_analysis.CouplingAnalysis attribute)
(pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute)
(pyunicorn.timeseries.surrogates.Surrogates attribute)
(pyunicorn.timeseries.visibility_graph.VisibilityGraph attribute)
similarity_measure() (pyunicorn.climate.climate_network.ClimateNetwork method)
similarity_measure_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
similarity_measure_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method)
sin_lat() (pyunicorn.core.grid.Grid method)
sin_lon() (pyunicorn.core.grid.Grid method)
size (in module pyunicorn.utils.mpi)
slave_queue (in module pyunicorn.utils.mpi)
SmallComplexNetwork() (pyunicorn.core.resistive_network.ResNetwork static method)
SmallTestData() (pyunicorn.climate.climate_data.ClimateData static method)
(pyunicorn.core.data.Data static method)
(pyunicorn.timeseries.surrogates.Surrogates static method)
SmallTestGrid() (pyunicorn.core.grid.Grid static method)
SmallTestNetwork() (pyunicorn.climate.climate_network.ClimateNetwork static method)
(pyunicorn.climate.tsonis.TsonisClimateNetwork static method)
(pyunicorn.core.geo_network.GeoNetwork static method)
(pyunicorn.core.interacting_networks.InteractingNetworks static method)
(pyunicorn.core.network.Network static method)
(pyunicorn.core.resistive_network.ResNetwork static method)
sp_A (pyunicorn.core.network.Network attribute)
sp_Aplus() (pyunicorn.core.network.Network method)
sp_diag_sqrt_w() (pyunicorn.core.network.Network method)
sp_diag_w() (pyunicorn.core.network.Network method)
sp_diag_w_inv() (pyunicorn.core.network.Network method)
sp_nsi_diag_k() (pyunicorn.core.network.Network method)
sp_nsi_diag_k_inv() (pyunicorn.core.network.Network method)
sparse_rqa (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute)
spatio-temporal window, [1]
SpearmanClimateNetwork (class in pyunicorn.climate.spearman)
splitted_copy() (pyunicorn.core.network.Network method)
spreading() (pyunicorn.core.network.Network method)
start_time (in module pyunicorn.utils.mpi)
stats (in module pyunicorn.utils.mpi)
submit_call() (in module pyunicorn.utils.mpi)
subnetwork() (pyunicorn.core.interacting_networks.InteractingNetworks method)
supremum_distance_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method)
(pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
surrogates
twins
Surrogates (class in pyunicorn.timeseries.surrogates)
symmetrize_by_absmax() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method)

T

terminate() (in module pyunicorn.utils.mpi)
test_data() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method)
test_mutual_information() (pyunicorn.timeseries.surrogates.Surrogates static method)
test_pearson_correlation() (pyunicorn.timeseries.surrogates.Surrogates static method)
test_threshold_significance() (pyunicorn.timeseries.surrogates.Surrogates method)
threshold() (pyunicorn.climate.climate_network.ClimateNetwork method)
threshold_from_link_density() (pyunicorn.climate.climate_network.ClimateNetwork method)
threshold_from_recurrence_rate
threshold_from_recurrence_rate() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method)
threshold_from_recurrence_rate_fast() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method)
time series
recurrence plot
time series
normalize
time series array
normalize, [1]
time_cycle (pyunicorn.climate.climate_data.ClimateData attribute)
time_series (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute)
(pyunicorn.timeseries.visibility_graph.VisibilityGraph attribute)
time_surrogate_for_cc() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)
time_surrogate_for_mi() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)
timings (pyunicorn.timeseries.visibility_graph.VisibilityGraph attribute)
title (pyunicorn.climate.map_plots.MapPlots attribute)
to_file() (pyunicorn.core.netcdf_dictionary.NetCDFDictionary method)
total_link_distance() (pyunicorn.core.geo_network.GeoNetwork method)
total_node_weight (pyunicorn.core.network.Network attribute)
total_time (in module pyunicorn.utils.mpi)
total_time_est (in module pyunicorn.utils.mpi)
trans_betweenness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
transitivity() (pyunicorn.core.network.Network method)
transitivity_dim_single_scale() (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method)
trapping time
trapping_time() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
TsonisClimateNetwork (class in pyunicorn.climate.tsonis)
twin surrogate
twin_surrogates() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
(pyunicorn.timeseries.surrogates.Surrogates method)
twins
recurrence plot
surrogates
twins() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
(pyunicorn.timeseries.surrogates.Surrogates method)

U

undirected_adjacency() (pyunicorn.core.network.Network method)
undirected_copy() (pyunicorn.core.network.Network method)
update_admittance() (pyunicorn.core.resistive_network.ResNetwork method)
update_R() (pyunicorn.core.resistive_network.ResNetwork method)
update_resistances() (pyunicorn.core.resistive_network.ResNetwork method)

V

vert_entropy() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
vertex_current_flow_betweenness() (pyunicorn.core.resistive_network.ResNetwork method)
vertical
line entropy
line length, average
line length, frequency distribution
line length, maximum
lines
vertline_dist() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
visibility_relations() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
visibility_relations_horizontal() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)
VisibilityGraph (class in pyunicorn.timeseries.visibility_graph)

W

WattsStrogatzGraph() (pyunicorn.core.network.Network static method)
weave_inline() (in module pyunicorn.core.network)
weighted_local_clustering() (pyunicorn.core.network.Network static method)
white vertical
line entropy
line length, average
line length, frequency distribution
line length, maximum
lines
white_noise_surrogates() (pyunicorn.timeseries.surrogates.Surrogates method)
white_vert_entropy() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
white_vertline_dist() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)
window() (pyunicorn.core.data.Data method)
winter_only() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method)
(pyunicorn.climate.tsonis.TsonisClimateNetwork method)

X

x (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute)
(pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute)
(pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)
x_embedded (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute)
(pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute)
(pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

Y

y (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute)
(pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute)
(pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)
y_embedded (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute)
(pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute)
(pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

Z

zero padded data
zero_pad_data() (pyunicorn.core.data.Data static method)