You are here: Home Services IT-Services Overview News R 3.5.1 installed

R 3.5.1 installed

An Intel-optimised R (v3.5.1) has been installed on the cluster.

R 3.5.1 has been installed on the cluster, using the Intel compilers for a performance optimised build. Many hard-to-install R packages (rgdal, udunits, sf, MODIStsp) have been installed in the system-wide library location (/p/system/packages/R/3.5.1/lib64/R/library/) for convenience.

The installed packages have been built against the following modules. Those marked with "*" are required for running the base R installation. Others may or may not be required, depending on which packages you load at runtime.

* R/3.5.1
* intel/2018.1
proj4/5.0.1
geos/3.6.1
gdal/2.3.2
udunits/2.2.26

The following R packages are installed system-wide:

       Package  Version
            BH 1.66.0-1
           DBI    1.0.0
    MODISTools    1.0.0
      MODIStsp    1.3.7
   R.methodsS3    1.7.1
          R.oo   1.22.0
       R.utils    2.7.0
            R6    2.3.0
  RColorBrewer    1.1-2
         RGtk2  2.20.35
          Rcpp    1.0.0
          Rmpi    0.6-9
    assertthat    0.2.0
     backports    1.1.2
     base64enc    0.1-3
         bindr    0.1.1
      bindrcpp    0.2.2
        bitops    1.0-6
         broom    0.5.1
   cairoDevice     2.25
         callr    3.1.0
    cellranger    1.1.0
      classInt    0.2-3
           cli    1.0.1
         clipr    0.4.1
    colorspace    1.3-2
        crayon    1.3.4
          curl      3.2
    data.table   1.11.8
        dbplyr    1.2.2
        digest   0.6.18
         dplyr    0.7.8
         e1071    1.7-0
      evaluate     0.12
         fansi    0.4.0
       forcats    0.3.0
       foreach    1.4.4
            fs    1.2.6
      gWidgets   0.0-54
 gWidgetsRGtk2   0.0-86
     gdalUtils 2.0.1.14
      generics    0.0.2
       ggplot2    3.1.0
          glue    1.3.0
        gtable    0.2.0
         haven    2.0.0
         highr      0.7
           hms    0.4.2
     htmltools    0.3.6
          httr    1.3.1
     iterators   1.0.10
      jsonlite      1.6
         knitr     1.21
      labeling      0.3
      lazyeval    0.2.1
     lubridate    1.7.4
      magrittr      1.5
      markdown      0.9
          mime      0.6
        modelr    0.1.2
       munsell    0.5.0
       openssl      1.1
        pacman    0.5.0
        pillar    1.3.0
     pkgconfig    2.0.2
         plogr    0.2.0
          plyr    1.8.4
      processx    3.2.1
            ps    1.2.1
         purrr    0.2.5
        raster    2.8-4
         readr    1.2.1
        readxl    1.1.0
       rematch    1.0.1
       remotes    2.0.2
        reprex    0.2.1
      reshape2    1.4.3
         rgdal    1.3-6
         rgeos    0.4-2
         rlang  0.3.0.1
     rmarkdown     1.11
    rstudioapi      0.8
         rvest    0.3.2
        scales    1.0.0
       selectr    0.4-1
            sf    0.7-1
            sp    1.3-1
        spData  0.2.9.6
       stringi    1.2.4
       stringr    1.3.1
        tibble    1.4.2
         tidyr    0.8.2
    tidyselect    0.2.5
     tidyverse    1.2.1
       tinytex      0.9
      udunits2     0.13
         units    0.6-2
          utf8    1.1.4
   viridisLite    0.3.0
       whisker    0.3-2
         withr    2.1.2
          xfun      0.4
          xml2    1.2.0
           xts   0.11-2
          yaml    2.2.0
           zoo    1.8-4
# Package list generated with:
ip <- as.data.frame(installed.packages()[,c(1,3:4)])
rownames(ip) <- NULL
ip <- ip[is.na(ip$Priority),1:2,drop=FALSE]
print(ip, row.names=FALSE)

Document Actions